Description Usage Arguments See Also
Given one or more scan result HDF5 files, create a digest of the results of
the QTL analyses. Results can be output for specific phenotypes, analyses,
and worksheets. These output constraints are applied with parameters
pheno
, scans
, and sheets
, respectively.
1 2 3 | run_digest(h5list = character(), digest = NA_character_,
pheno = character(), scans = character(), sheets = character(),
scanfile.pattern = NA_character_)
|
h5list |
list of HDF5 scan files [required] |
digest |
scan digest file [required] |
pheno |
phenotypes to output [default: all] |
scans |
analyses to output [default: all] |
sheets |
worksheets to output |
scanfile.pattern |
scan file name pattern |
Other pipeline functions: run_annoqtl
,
run_estimap
, run_interptimes
,
run_makecross
, run_makegeno
,
run_prep
, run_pullmap
,
run_pushmap
, run_recode
,
run_report
, run_scanone
,
run_scantwo
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