run_pullmap: Pull map from a data file.

In gact/shmootl: QTL Analysis Utilities for Yeast

Description

Pull the map from a CSV or HDF5 file, and write it to a separate map CSV file. If a HDF5 data file contains multiple maps, the mapname parameter must specify which map to pull.

Usage

run_pullmap(datafile = NA_character_, mapfile = NA_character_,
  mapname = NA_character_, require.mapunit = TRUE, include.mapunit = TRUE)

Arguments

datafile	file containing map data [required]
mapfile	output map CSV file [required]
mapname	name of map (if applicable)
require.mapunit	require map units in input
include.mapunit	include map units in output

See Also

Other pipeline functions: run_annoqtl, run_digest, run_estimap, run_interptimes, run_makecross, run_makegeno, run_prep, run_pushmap, run_recode, run_report, run_scanone, run_scantwo

gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.