run_pushmap: Push map into a data file.

In gact/shmootl: QTL Analysis Utilities for Yeast

Description

Add or replace the map of the specified CSV or HDF5 file with the data from the given map file. If the mapname parameter is given for a HDF5 data file, the map is assigned that name and when being written to the HDF5 file. Otherwise, a default map name (e.g. 'Genetic Map') is used.

Usage

run_pushmap(mapfile = NA_character_, datafile = NA_character_,
  mapname = NA_character_, require.mapunit = TRUE, include.mapunit = TRUE)

Arguments

mapfile	input map CSV file [required]
datafile	file with map data [required]
mapname	name of map (if applicable)
require.mapunit	require map units in input
include.mapunit	include map units in output

See Also

Other pipeline functions: run_annoqtl, run_digest, run_estimap, run_interptimes, run_makecross, run_makegeno, run_prep, run_pullmap, run_recode, run_report, run_scanone, run_scantwo

gact/shmootl documentation built on Nov. 11, 2021, 6:23 p.m.