Files in gamerino/NBSplice

Negative Binomial Models to detect Differential Splicing

R/IsoDataSet-NBTest.R R/IsoDataSet-buildLowExpIdx.R R/IsoDataSet-constructor.R R/IsoDataSet-core.R R/IsoDataSet-getters.R R/IsoDataSet-initialize.R R/IsoDataSet-print.R R/IsoDataSet-show.R R/IsoDataSet.R R/NBSplice-designMatrix.R R/NBSplice-geneIso.R R/NBSplice-isoCounts.R R/NBSplice-myDSResults.R R/NBSplice-myIsoDataSet.R R/NBSplice-package.R R/NBSpliceRes-constructor.R R/NBSpliceRes-getDSGenes.R R/NBSpliceRes-getDSResults.R R/NBSpliceRes-getGeneResults.R R/NBSpliceRes-getters.R R/NBSpliceRes-initialize.R R/NBSpliceRes-plotGeneResults.R R/NBSpliceRes-plotRatiosDisp.R R/NBSpliceRes-plotVolcano.R R/NBSpliceRes-print.R R/NBSpliceRes-show.R R/NBSpliceRes.R R/totalGeneCounts.R README.md inst/unitTests/test_NBSplice.R man/IsoDataSet-NBTest.Rd man/IsoDataSet-buildLowExpIdx.Rd man/IsoDataSet-class.Rd man/IsoDataSet-constructor.Rd man/IsoDataSet-core.Rd man/IsoDataSet-getters.Rd man/IsoDataSet-initialize.Rd man/IsoDataSet-print.Rd man/IsoDataSet-show.Rd man/NBSplice-package.Rd man/NBSpliceRes-GetDSGenes.Rd man/NBSpliceRes-GetDSResults.Rd man/NBSpliceRes-GetGeneResults.Rd man/NBSpliceRes-class.Rd man/NBSpliceRes-constructor.Rd man/NBSpliceRes-getters.Rd man/NBSpliceRes-initialize.Rd man/NBSpliceRes-plotGeneResults.Rd man/NBSpliceRes-plotRatiosDisp.Rd man/NBSpliceRes-plotVolcano.Rd man/NBSpliceRes-print.Rd man/NBSpliceRes-show.Rd man/designMatrix.Rd man/geneIso.Rd man/isoCountsData.Rd man/myDSResults.Rd man/myIsoDataSet.Rd man/totalGeneCounts.Rd tests/runTests.R vignettes/NBSplice-vignette.R vignettes/NBSplice-vignette.Rmd