autm_3d: Automorphisms between DNA Sequences from two COVID-19 genomes

autm_3dR Documentation

Automorphisms between DNA Sequences from two COVID-19 genomes

Description

This is a AutomorphismList object carrying a list of pairwise automorphisms between the SARS coronavirus GZ02 (GenBank: AY390556.1: 265-13398_13398-21485) and Bat SARS-like coronavirus isolate bat-SL-CoVZC45 (GenBank: MG772933.1:265-1345513455-21542), nonstructural_polyprotein. The pairwise DNA sequence alignment is available in the dataset named covid_aln and the automorphisms were estimated with function aut3D.

Usage

data("autm_3d", package = "GenomAutomorphism")

Format

AutomorphismList class object.

Examples

data("autm_3d", package = "GenomAutomorphism")
autm_3d


genomaths/GenomAutomorphism documentation built on April 29, 2024, 4:31 p.m.