brca1_autm2: Automorphisms between DNA Sequences from Primate BRCA1 Genes
In genomaths/GenomAutomorphism: Compute the automorphisms between DNA's Abelian group representations
brca1_autm2 R Documentation
Automorphisms between DNA Sequences from Primate BRCA1 Genes
Description
This is a AutomorphismList object carrying a list of pairwise
automorphisms between the DNA sequences from the MSA of primate BRCA1
DNA repair gene. The data set brca1_aln2 has 41 DNA sequences and it
contains the previous 20 primate variants found in 'braca1_aln' data set
plus 21 single mutation variants (SMV) from the human sequence NM_007298
transcript variant 4. The location of each SMV is given in the heading from
each sequence. The automorphisms were estimated from the brca1_aln MSA
with function autZ64.
Usage
data("brca1_autm2", package = "GenomAutomorphism")
Format
AutomorphismList class object.
genomaths/GenomAutomorphism documentation built on Dec. 12, 2024, 2:12 p.m.
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| brca1_autm2 | R Documentation |
Automorphisms between DNA Sequences from Primate BRCA1 Genes
Description
This is a AutomorphismList object carrying a list of pairwise automorphisms between the DNA sequences from the MSA of primate BRCA1 DNA repair gene. The data set brca1_aln2 has 41 DNA sequences and it contains the previous 20 primate variants found in 'braca1_aln' data set plus 21 single mutation variants (SMV) from the human sequence NM_007298 transcript variant 4. The location of each SMV is given in the heading from each sequence. The automorphisms were estimated from the brca1_aln MSA with function autZ64.
Usage
data("brca1_autm2", package = "GenomAutomorphism")
Format
AutomorphismList class object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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