covid_aln: Pairwise Sequence Alignment (MSA) of COVID-19 genomes.

covid_alnR Documentation

Pairwise Sequence Alignment (MSA) of COVID-19 genomes.

Description

This is a DNAMultipleAlignment carrying the pairwise sequence alignment of SARS coronavirus GZ02 (GenBank: AY390556.1: 265-13398_13398-21485) and Bat SARS-like coronavirus isolate bat-SL-CoVZC45 (GenBank: MG772933.1:265-1345513455-21542), complete genomes. The alignment is available at GitHub: https://github.com/genomaths/seqalignments/tree/master/COVID-19

Usage

data("covid_aln", package = "GenomAutomorphism")

Format

DNAMultipleAlignment class object.

Author(s)

Robersy Sanchez https://genomaths.com

See Also

brca1_aln, brca1_autm2, cyc_aln and covid_aln.

Examples

data("covid_aln", package = "GenomAutomorphism")
covid_aln


genomaths/GenomAutomorphism documentation built on May 10, 2024, 12:11 a.m.