covid_autm: Automorphisms between DNA Sequences from two COVID-19 genomes

covid_autmR Documentation

Automorphisms between DNA Sequences from two COVID-19 genomes

Description

This is a AutomorphismList object carrying a list of pairwise automorphisms between the SARS coronavirus GZ02 (GenBank: AY390556.1: 265-13398_13398-21485) and Bat SARS-like coronavirus isolate bat-SL-CoVZC45 (GenBank: KY417151.1: protein-coding regions). The pairwise DNA sequence alignment is available in the dataset named covid_aln and the automorphisms were estimated with function autZ64.

Usage

data("covid_autm", package = "GenomAutomorphism")

Format

AutomorphismList class object.

Author(s)

Robersy Sanchez https://genomaths.com

See Also

brca1_autm, brca1_autm2, cyc_autm, and covid_aln.

Examples

data("covid_autm", package = "GenomAutomorphism",
    envir = environment())
covid_autm


genomaths/GenomAutomorphism documentation built on May 10, 2024, 12:11 a.m.