brca1_aln2: Multiple Sequence Alignment (MSA) of Primate BRCA1 DNA repair...
In genomaths/GenomAutomorphism: Compute the automorphisms between DNA's Abelian group representations
brca1_aln2 R Documentation
Multiple Sequence Alignment (MSA) of Primate BRCA1 DNA repair genes.
Description
This is a DNAMultipleAlignment carrying a MSA of
BRCA1 DNA repair genes to be used in the
examples provided for the package functions. The original file can be
downloaded from GitHub at: https://bit.ly/3DimROD. This data set has
41 DNA sequences and it contains the previous 20 primate variants found in
'brca1_aln' data set plus 21 single mutation variants (SMV) from the human
sequence NM_007298 transcript variant 4. The location of each SMV is given
in the heading from each sequence.
Usage
data("brca1_aln2", package = "GenomAutomorphism")
Format
DNAMultipleAlignment class object.
Author(s)
Robersy Sanchez https://genomaths.com
See Also
brca1_aln, brca1_autm2, cyc_aln, and covid_autm.
Examples
data("brca1_aln2", package = "GenomAutomorphism")
brca1_aln2
genomaths/GenomAutomorphism documentation built on May 10, 2024, 12:11 a.m.
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| brca1_aln2 | R Documentation |
Multiple Sequence Alignment (MSA) of Primate BRCA1 DNA repair genes.
Description
This is a DNAMultipleAlignment carrying a MSA of
BRCA1 DNA repair genes to be used in the
examples provided for the package functions. The original file can be
downloaded from GitHub at: https://bit.ly/3DimROD. This data set has
41 DNA sequences and it contains the previous 20 primate variants found in
'brca1_aln' data set plus 21 single mutation variants (SMV) from the human
sequence NM_007298 transcript variant 4. The location of each SMV is given
in the heading from each sequence.
Usage
data("brca1_aln2", package = "GenomAutomorphism")
Format
DNAMultipleAlignment class object.
Author(s)
Robersy Sanchez https://genomaths.com
See Also
brca1_aln, brca1_autm2, cyc_aln, and covid_autm.
Examples
data("brca1_aln2", package = "GenomAutomorphism")
brca1_aln2
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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