brca1_aln2: Multiple Sequence Alignment (MSA) of Primate BRCA1 DNA repair...

brca1_aln2R Documentation

Multiple Sequence Alignment (MSA) of Primate BRCA1 DNA repair genes.

Description

This is a DNAMultipleAlignment carrying a MSA of BRCA1 DNA repair genes to be used in the examples provided for the package functions. The original file can be downloaded from GitHub at: https://bit.ly/3DimROD. This data set has 41 DNA sequences and it contains the previous 20 primate variants found in 'brca1_aln' data set plus 21 single mutation variants (SMV) from the human sequence NM_007298 transcript variant 4. The location of each SMV is given in the heading from each sequence.

Usage

data("brca1_aln2", package = "GenomAutomorphism")

Format

DNAMultipleAlignment class object.

Author(s)

Robersy Sanchez https://genomaths.com

See Also

brca1_aln, brca1_autm2, cyc_aln, and covid_autm.

Examples

data("brca1_aln2", package = "GenomAutomorphism")
brca1_aln2


genomaths/GenomAutomorphism documentation built on May 10, 2024, 12:11 a.m.