results-VaeModel-Vplots-method: results

In gongx030/seatac: ATAC-seq V-plot analysis

results

Description

Test the difference between two Vplots

Usage

## S4 method for signature 'VaeModel,Vplots'
results(model, x, type = NULL, contrast = NULL, ...)

Arguments

model	a trained VaeModel object
x	a Vplots object
type	Tesing type ('phase', 'nucleosome', or 'vplots')
contrast	this argument species a character vector with exactly three elements: the name of a factor in the design formula, the name of the numerator level for the fold change, and the name of the denominator level for the fold change (simplest case)
...	Other arguments

Value

a GRanges object

Author(s)

Wuming Gong ([e-mail])

gongx030/seatac documentation built on April 15, 2023, 5:53 a.m.