grimbough/IONiseR: Quality Assessment Tools for Oxford Nanopore MinION data
IONiseR provides tools for the quality assessment of Oxford Nanopore MinION data. It extracts summary statistics from a set of fast5 files and can be used either before or after base calling. In addition to standard summaries of the read-types produced, it provides a number of plots for visualising metrics relative to experiment run time or spatially over the surface of a flowcell.
Getting started
Browse package contents
Package details |
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| Author | Mike Smith [aut, cre] |
| Bioconductor views | DataImport QualityControl Sequencing |
| Maintainer | Mike Smith <grimbough@gmail.com> |
| License | MIT + file LICENSE |
| Version | 2.13.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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