muxHeatmap: Create layout plot of flowcell

Description Usage Arguments Value

View source: R/plotting_layout.R

Description

Creates a plot representing the layout of a MinION flow cell. Each circle represents an individual channel with the intensity relecting a specified sequencing metric. This function is a more generalised version of layoutPlot, allowing the user to map any value the like on the channel layout.

Usage

1
muxHeatmap(data, zValue)

Arguments

data

A data.frame. Should have at least two columns, one of which has the name 'channel'.

zValue

Character string specifying the name of the column to be used for the colour scaling.

Value

Returns an object of gg representing the plot.


grimbough/IONiseR documentation built on Sept. 24, 2020, 11:32 a.m.