fastq: Extract fastq slot

In grimbough/IONiseR: Quality Assessment Tools for Oxford Nanopore MinION data

Description

This generic function accesses the fastq slot stored in an object derived from the Fast5Summary class.

Usage

fastq(x)

Arguments

x	Object of class Fast5Summary

Value

A ShortReadQ object

Examples

if( require(minionSummaryData) ) {
   data(s.typhi.rep2, package = 'minionSummaryData')
   fastq( s.typhi.rep2 )
}

grimbough/IONiseR documentation built on Sept. 24, 2020, 11:32 a.m.