Files in grimbough/IONiseR
Quality Assessment Tools for Oxford Nanopore MinION data
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/IONiseR.R
R/Methods-accessors.R
R/Methods-subsetting.R
R/classes.R
R/fast5Readers.R
R/fast5Status.R
R/fast5readers_summary.R
R/fast5utilities.R
R/fastqProcessing.R
R/plotting_kmers.R
R/plotting_layout.R
R/plotting_summaryStats.R
R/processing_bam.R
R/readSummary.R
R/squiggle.R
README.md
inst/extdata/example.fast5
inst/extdata/example_not-working.fast5
inst/extdata/example_v2.fast5
man/Fast5Summary-class.Rd
man/IONiseR.Rd
man/baseCalled.Rd
man/channelActivityPlot.Rd
man/channelHeatmap.Rd
man/eventData.Rd
man/fast5toFastq.Rd
man/fastq.Rd
man/fastq2D.Rd
man/fastqComplement.Rd
man/fastqTemplate.Rd
man/layoutPlot.Rd
man/muxHeatmap.Rd
man/plotActiveChannels.Rd
man/plotBaseProductionRate.Rd
man/plotCurrentByTime.Rd
man/plotEventRate.Rd
man/plotKmerFrequencyCorrelation.Rd
man/plotReadAccumulation.Rd
man/plotReadCategoryCounts.Rd
man/plotReadCategoryQuals.Rd
man/plotReadTypeProduction.Rd
man/readFast5Log.Rd
man/readFast5Summary.Rd
man/readInfo.Rd
tests/testthat.R
tests/testthat/test_Fast5Summary.R
tests/testthat/test_fastq.R
tests/testthat/test_plotting.R
vignettes/ChannelKmer.png
vignettes/IONiseR.Rmd
vignettes/bibliography.bib
vignettes/bmc-bioinformatics.csl
