msigdbr: Download database from Msigdb and prepare for enrichment...

Description Usage Arguments Author(s)

Description

Download database from Msigdb and prepare for enrichment analysis

Usage

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makeMSIGDB(
  species = "human",
  keytype = "SYMBOL",
  subcategory = NULL,
  category = NULL,
  path = "./",
  save = FALSE
)

Arguments

species

the species for query

keytype

the gene ID type

subcategory

Gene Set subcategory

category

Gene set category

path

path to save the dataset

save

save the dataset or not

Author(s)

Kai Guo


guokai8/EnrichR documentation built on May 18, 2020, 5:29 a.m.