KE.plot: Display KEGG enrichment result

In guokai8/EnrichR: Functional Enrichment analysis

Description

Display KEGG enrichment result

Usage

KE.plot(
  resultFis,
  pvalue.cutoff = 0.05,
  top = 50,
  order = FALSE,
  low = "lightpink",
  high = "red",
  alpha = 0.7,
  font.x = "bold",
  font.y = "bold",
  fontsize.x = 10,
  fontsize.y = 10,
  padj.cutoff = NULL,
  usePadj = TRUE,
  filename = NULL,
  width = 10,
  height = 8
)

Arguments

order	order bar or not
low	color used for small value
high	color used for large value
alpha	alpha-transparency scales
fontsize.x	fontsize for x axis
fontsize.y	fontsize for y axis
usePadj	use adjust pvalue or not
filename	output filename
width	width for output file
height	height for output file
resultFis:	KEGG ennrichment analysis result data.frame
top:	Number of Terms you want to display
filename:	output filename
pvalue.cutoff:	the cut-off value for selecting Term
padj.cutoff:	the padj cut-off value for selecting Term
horiz	use horiz or not

Author(s)

Kai Guo

guokai8/EnrichR documentation built on May 18, 2020, 5:29 a.m.