get_biomart: Get biomart annotation from id
In hbc/CHBUtils: "Useful utility functions used at the core"
Description
Usage
Arguments
Value
See Also
Examples
Description
Get biomart annotation from id
Usage
1
2
get_biomart(v, type = "description", id = "ensembl_gene_id",
dataset = "hsapiens_gene_ensembl")
Arguments
v
vector of ids
type
character name to get from biomart
id
character defining what kind of id is provided
dataset
specie database to connect to biomart
Value
annotated vector in the same order
See Also
biomaRt used to annotate the dataframe
Examples
1
get_biomrt(v, "gene_biotype")
hbc/CHBUtils documentation built on May 17, 2019, 3:07 p.m.
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Description Usage Arguments Value See Also Examples
Description
Get biomart annotation from id
Usage
1 2 | get_biomart(v, type = "description", id = "ensembl_gene_id",
dataset = "hsapiens_gene_ensembl")
|
Arguments
v |
vector of ids |
type |
character name to get from biomart |
id |
character defining what kind of id is provided |
dataset |
specie database to connect to biomart |
Value
annotated vector in the same order
See Also
biomaRt used to annotate the dataframe
Examples
1 | get_biomrt(v, "gene_biotype")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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