runGO: Run GO using clusterprofiler

Description Usage Arguments

Description

Run GO using clusterprofiler

Usage

1
runGO(genes, org, from = "SYMBOL", ont = "BP", universe = NULL)

Arguments

genes

character vector with list of genes

org

OrgDb object (org.Mm.eg.db)

from

character indicanting the name gene type. Options at: (keytypes(org.Mm.eg.db))

ont

ontology to do, BP, MF, CC

universe

character vector with list of genes to use as universe


hbc/CHBUtils documentation built on May 17, 2019, 3:07 p.m.