Description Usage Arguments Examples
Plots the differntially expressed genes on an MA plot, ggplot style If adjusted pvalues are present, colors those that pass cutoff red
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pvaldf |
dataframe, required |
basemean_colid |
character string, column header of column containing baseMean values, required |
log2foldchange_colid |
character string, column header of column containing log2 transformed fold change values, required |
adj_pval_colid |
character string,column header of column containing adjusted pvalues, required |
adj_pval_cutoff, |
optional, defaults to 0.05 |
plottitle |
character string, title for the plot, optional, defaults to "MA plot" |
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