get_gxg: Get gene interactions
In hclimente/martini: GWAS Incorporating Networks
get_gxg R Documentation
Get gene interactions
Description
Wrapper for the different functions to get gene-gene
interactions. Supports cached results.
Usage
get_gxg(db, organism, flush)
Arguments
db
String containing the database to obtain the gene-gene interactions
from. Possible values: 'biogrid', 'string'.
organism
Tax ID of the studied organism. The default is 9606 (human).
flush
Remove cached results? Boolean value.
Value
A data.frame with two columns with pairs of interacting proteins.
hclimente/martini documentation built on Feb. 26, 2024, 6:23 p.m.
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| get_gxg | R Documentation |
Get gene interactions
Description
Wrapper for the different functions to get gene-gene interactions. Supports cached results.
Usage
get_gxg(db, organism, flush)
Arguments
db |
String containing the database to obtain the gene-gene interactions from. Possible values: 'biogrid', 'string'. |
organism |
Tax ID of the studied organism. The default is 9606 (human). |
flush |
Remove cached results? Boolean value. |
Value
A data.frame with two columns with pairs of interacting proteins.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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