get_gxg_string: Get STRING protein-protein interactions.
In hclimente/martini: GWAS Incorporating Networks
get_gxg_string R Documentation
Get STRING protein-protein interactions.
Description
Get all protein-protein interactions for an organism from
STRING. It uses a score cut-off of 400.
Usage
get_gxg_string(organism = 9606)
Arguments
organism
Tax ID of the studied organism. The default is 9606 (human).
Value
A data.frame with two columns with pairs of interacting proteins.
Examples
# download frog interactions
## Not run: martini:::get_gxg_string(8364)
hclimente/martini documentation built on Feb. 26, 2024, 6:23 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| get_gxg_string | R Documentation |
Get STRING protein-protein interactions.
Description
Get all protein-protein interactions for an organism from STRING. It uses a score cut-off of 400.
Usage
get_gxg_string(organism = 9606)
Arguments
organism |
Tax ID of the studied organism. The default is 9606 (human). |
Value
A data.frame with two columns with pairs of interacting proteins.
Examples
# download frog interactions
## Not run: martini:::get_gxg_string(8364)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.