group_snps: Groups nearby SNPs
In hclimente/martini: GWAS Incorporating Networks
group_snps R Documentation
Groups nearby SNPs
Description
Groups SNPs closer than a specifiec threshold of distance.
Usage
group_snps(bed, chr_col, pos_col, threshold)
Arguments
bed
data.frame containing at least two properties (chromosome and
position) of a set of SNPs.
chr_col
Name of the column containing the SNP chromosome.
pos_col
Name of the column containing the SNP position.
threshold
Maximum distance to group two SNPs group.
Value
A data.frame in bed format, with the same dimensions as the original,
but with the groups.
hclimente/martini documentation built on Feb. 26, 2024, 6:23 p.m.
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| group_snps | R Documentation |
Groups nearby SNPs
Description
Groups SNPs closer than a specifiec threshold of distance.
Usage
group_snps(bed, chr_col, pos_col, threshold)
Arguments
bed |
data.frame containing at least two properties (chromosome and position) of a set of SNPs. |
chr_col |
Name of the column containing the SNP chromosome. |
pos_col |
Name of the column containing the SNP position. |
threshold |
Maximum distance to group two SNPs group. |
Value
A data.frame in bed format, with the same dimensions as the original, but with the groups.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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