stepGUIDANCE: Detect Homology Uncertainty in Alingment
In heibl/megaptera: MEGAPhylogeny Techniques in R
Description
Usage
Arguments
Value
See Also
Description
Use GUIDANCE, GUIDANCE2 or HoT to calculate column-wise
reliability scores for alignments.
Usage
1
stepGUIDANCE(x, bootstrap = 100)
Arguments
x
An object of class megapteraProj.
bootstrap
An integer giving the number of alternative MSAs to be computed.
Value
None, stepGUIDANCE is called for its side effects.
See Also
megapteraProj; stepMAFFT for the
preceeding step and stepH for the subsequent step.
heibl/megaptera documentation built on Jan. 17, 2021, 3:34 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also
Description
Use GUIDANCE, GUIDANCE2 or HoT to calculate column-wise reliability scores for alignments.
Usage
1 | stepGUIDANCE(x, bootstrap = 100)
|
Arguments
x |
An object of class |
bootstrap |
An integer giving the number of alternative MSAs to be computed. |
Value
None, stepGUIDANCE is called for its side effects.
See Also
megapteraProj; stepMAFFT for the
preceeding step and stepH for the subsequent step.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.