Files in hemberg-lab/SC3
Single-Cell Consensus Clustering
.Rbuildignore
.github/ISSUE_TEMPLATE/bug_report.md
DESCRIPTION
LICENSE
NAMESPACE
R/AllGenerics.R
R/CoreFunctions.R
R/CoreMethods.R
R/PlotMethods.R
R/RcppExports.R
R/ShinyFunctions.R
R/ShinyMethods.R
README.md
data/yan.rda
inst/CITATION
inst/NEWS
inst/SC3.png
man/ED1.Rd
man/ED2.Rd
man/ann.Rd
man/calculate_distance.Rd
man/calculate_stability.Rd
man/consensus_matrix.Rd
man/consmx.Rd
man/estkTW.Rd
man/get_auroc.Rd
man/get_biolgy.Rd
man/get_de_genes.Rd
man/get_marker_genes.Rd
man/get_outl_cells.Rd
man/get_processed_dataset.Rd
man/markers_for_heatmap.Rd
man/norm_laplacian.Rd
man/organise_de_genes.Rd
man/organise_marker_genes.Rd
man/prepare_for_svm.Rd
man/reindex_clusters.Rd
man/sc3.Rd
man/sc3_calc_biology.Rd
man/sc3_calc_consens.Rd
man/sc3_calc_dists.Rd
man/sc3_calc_transfs.Rd
man/sc3_estimate_k.Rd
man/sc3_export_results_xls.Rd
man/sc3_interactive.Rd
man/sc3_kmeans.Rd
man/sc3_plot_cluster_stability.Rd
man/sc3_plot_consensus.Rd
man/sc3_plot_de_genes.Rd
man/sc3_plot_expression.Rd
man/sc3_plot_markers.Rd
man/sc3_plot_silhouette.Rd
man/sc3_prepare.Rd
man/sc3_run_svm.Rd
man/support_vector_machines.Rd
man/tmult.Rd
man/transformation.Rd
man/yan.Rd
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/cppFunctions.cpp
vignettes/SC3.Rmd
