get_marker_genes: Calculate marker genes
In hemberg-lab/SC3: Single-Cell Consensus Clustering

Find marker genes in the dataset. The get_auroc is used to calculate marker values for each gene.

1	get_marker_genes(dataset, labels)

`dataset`	expression matrix
`labels`	cell labels corresponding clusters

data.frame containing the marker genes, corresponding cluster indexes and adjusted p-values

1 2	d <- get_marker_genes(yan[1:10,], as.numeric(ann [,1])) d

hemberg-lab/SC3 documentation built on Dec. 18, 2019, 10:02 p.m.

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