make_expression_normalizefun: Generate the default function expression-normalized for...
In ilia-kats/RiboSeqTools: Tools for analysis of selective ribosome profiling (SeRP) data
Description
Usage
Arguments
Value
See Also
Description
Each gene is normalized to its total exression divided by its length.
Usage
1
make_expression_normalizefun(data, sample2)
Arguments
data
A serp_data object
sample2
Name of the sample which all other samples will be normalized against. If missing,
the default sample2 of the data set (usually the total translatome) will be used. If missing
and no default is set, each sample will be normalized to its own expression.
Value
A function that can be passed as normalizefun to metagene_profiles
See Also
defaults, metagene_profiles, make_average_profilefun,
make_enrichment_profilefun
ilia-kats/RiboSeqTools documentation built on Oct. 5, 2020, 7:41 p.m.
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Description Usage Arguments Value See Also
Description
Each gene is normalized to its total exression divided by its length.
Usage
1 | make_expression_normalizefun(data, sample2)
|
Arguments
data |
A |
sample2 |
Name of the sample which all other samples will be normalized against. If missing, the default sample2 of the data set (usually the total translatome) will be used. If missing and no default is set, each sample will be normalized to its own expression. |
Value
A function that can be passed as normalizefun to metagene_profiles
See Also
defaults, metagene_profiles, make_average_profilefun,
make_enrichment_profilefun
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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