Files in immunogenomics/presto
Fast Functions for Differential Expression using Wilcox and AUC
.Rbuildignore
.github/workflows/R-CMD-check.yaml
.gitignore
CRAN-RELEASE
DESCRIPTION
NAMESPACE
NEWS.md
R/RcppExports.R
R/data.R
R/presto-package.R
R/pseudobulk.R
R/utils.R
R/wilcoxauc.R
README.md
cran-comments.md
data/exprs.rda
data/object_sce.rda
data/object_seurat.rda
data/y.rda
docs/.nojekyll
docs/404.html
docs/articles/getting-started.html
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/collapse_counts.html
docs/reference/compute_hash.html
docs/reference/exprs.html
docs/reference/index.html
docs/reference/nnzeroGroups.html
docs/reference/object_sce.html
docs/reference/object_seurat.html
docs/reference/pipe.html
docs/reference/presto.html
docs/reference/pseudobulk_deseq2.html
docs/reference/pseudobulk_one_vs_all.html
docs/reference/pseudobulk_pairwise.html
docs/reference/pseudobulk_within.html
docs/reference/rank_matrix.html
docs/reference/sumGroups.html
docs/reference/summarize_dge_pairs.html
docs/reference/top_markers.html
docs/reference/top_markers_dds.html
docs/reference/wilcoxauc.html
docs/reference/y.html
docs/sitemap.xml
man/collapse_counts.Rd
man/compute_hash.Rd
man/exprs.Rd
man/nnzeroGroups.Rd
man/object_sce.Rd
man/object_seurat.Rd
man/pipe.Rd
man/presto.Rd
man/pseudobulk_deseq2.Rd
man/pseudobulk_one_vs_all.Rd
man/pseudobulk_pairwise.Rd
man/pseudobulk_within.Rd
man/rank_matrix.Rd
man/sumGroups.Rd
man/summarize_dge_pairs.Rd
man/top_markers.Rd
man/top_markers_dds.Rd
man/wilcoxauc.Rd
man/y.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/fast_wilcox.cpp
tests/testthat.R
tests/testthat/test_correctness.R
tests/testthat/test_datatypes.R
vignettes/getting-started.Rmd
vignettes/pseudobulk.ipynb
