plotOccupancy: Plot class occupancy distributions

In jasenfinch/metabolyseR: Methods for Pre-Treatment, Data Mining and Correlation Analyses of Metabolomics Data

Plot class occupancy distributions

Description

Plot class occupancy distributions.

Usage

plotOccupancy(x, cls = "class", ...)

## S4 method for signature 'AnalysisData'
plotOccupancy(x, cls = "class")

## S4 method for signature 'Analysis'
plotOccupancy(x, cls = "class", type = "raw")

Arguments

x	S4 object of class AnalysisData or Analysis
cls	sample information column to use for class labels
...	arguments to pass to the appropriate method
type	raw or preTreated data to plot

Examples

library(metaboData)

d <- analysisData(abr1$neg,abr1$fact)

## Plot class occupancy distributions
plotOccupancy(d,cls = 'day')

jasenfinch/metabolyseR documentation built on Sept. 18, 2023, 1:25 a.m.