bootstrap_cv_test: Bootstrapping to estimate confidence interval for individual...
In jhsiao999/Humanzee: Tools for statistical analysis of genomics data
Description
Usage
Arguments
Examples
Description
For each gene, resample within each individual and compute a
confidence interval of each individual coefficient of variation
based on the boostrapped samples. The method was developed for
Tung et al. (2016) for comparing cell-to-cell heterogeneity between
individuals
Usage
1
2
3
bootstrap_cv_test(log2counts, grouping_vector, anno, number_bootstrap,
size_bootstrap, output_rda = FALSE, do_parallel = FALSE,
number_cores = NULL)
Arguments
log2counts
log2 count matrix of gene by cell.
number_bootstrap
Number of boostrapped samples.
group_cv
CVs per batch computed use compute_cv().
Examples
1
jhsiao999/Humanzee documentation built on May 19, 2019, 9:28 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Examples
Description
For each gene, resample within each individual and compute a confidence interval of each individual coefficient of variation based on the boostrapped samples. The method was developed for Tung et al. (2016) for comparing cell-to-cell heterogeneity between individuals
Usage
1 2 3 | bootstrap_cv_test(log2counts, grouping_vector, anno, number_bootstrap,
size_bootstrap, output_rda = FALSE, do_parallel = FALSE,
number_cores = NULL)
|
Arguments
log2counts |
log2 count matrix of gene by cell. |
number_bootstrap |
Number of boostrapped samples. |
group_cv |
CVs per batch computed use compute_cv(). |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.