testDE: Inter-species divergence likelihood ratio test

In jhsiao999/Humanzee: Tools for statistical analysis of genomics data

Description

This function tests for divergence between two species in one molecular phenotype at a time.

Usage

testDE(eSet, seqData, species)

Arguments

eSet	Expression set
seqData	A factor vector of sequencing data type.
species	A factor vector of species.

Examples

load(file.path(rdadir,"eSetRRP.rda"))
massRes = testDE(eSetRRPall,seqData="protein",species=c("human","chimp"))$massRes

jhsiao999/Humanzee documentation built on May 19, 2019, 9:28 a.m.