QCexpressionMatrix: Do basic QC for a expression matrix.

In jmzeng1314/humanid: gene id annotation

Description

Basic QC include:boxplot and hist figures for expression value distribution correlations among the samples by clustering

Usage

QCexpressionMatrix(exprSet, group_list = "NO", prefix = "test")

Arguments

exprSet	a expression matrix, which columns are sample,rows are HUGO gene symbols.
group_list	a vector,as long as the col number for the expression matrix,which describe the group for the samples in exprSet
prefix	The prefix for all of the output files.

Value

generate QC figures for expression matrix

Examples

#' QCexpressionMatrix(example_exprSet,group_list,prefix='test')

jmzeng1314/humanid documentation built on May 19, 2019, 2:57 p.m.