QCexpressionMatrix: Do basic QC for a expression matrix.

Description Usage Arguments Value Examples

View source: R/QCexpressionMatrix.R

Description

Basic QC include:boxplot and hist figures for expression value distribution correlations among the samples by clustering

Usage

1
QCexpressionMatrix(exprSet, group_list = "NO", prefix = "test")

Arguments

exprSet

a expression matrix, which columns are sample,rows are HUGO gene symbols.

group_list

a vector,as long as the col number for the expression matrix,which describe the group for the samples in exprSet

prefix

The prefix for all of the output files.

Value

generate QC figures for expression matrix

Examples

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#' QCexpressionMatrix(example_exprSet,group_list,prefix='test')

jmzeng1314/humanid documentation built on May 19, 2019, 2:57 p.m.