RRNA-package: RNA secondary structure ploting
In jpbida/RRNA: Secondary Structure Plotting for RNA
RRNA-package R Documentation
RNA secondary structure ploting
Description
Set of functions for creating and manipulating RNA secondary structure plots from CT files or bracket notations.
Details
Package: RRNA
Type: Package
Version: 1.0
Date: 2015-07-27
License: GPL-3
Author(s)
JP Bida
Maintainer: JP Bida <bida.john@gmail.com
Examples
### Create a CT file from bracket notation
ct=makeCt("(((...(((...)))...(((...)))...)))","AAAUUUCCCAAAGGGUUUAAAGGGUUUCCCUUU")
coord=ct2coord(ct)
RNAPlot(coord,hl=c("GGGUUU","AAAUUU"),seqcols=c(2,4),labTF=TRUE)
jpbida/RRNA documentation built on April 28, 2024, 1:27 p.m.
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| RRNA-package | R Documentation |
RNA secondary structure ploting
Description
Set of functions for creating and manipulating RNA secondary structure plots from CT files or bracket notations.
Details
| Package: | RRNA |
| Type: | Package |
| Version: | 1.0 |
| Date: | 2015-07-27 |
| License: | GPL-3 |
Author(s)
JP Bida Maintainer: JP Bida <bida.john@gmail.com
Examples
### Create a CT file from bracket notation
ct=makeCt("(((...(((...)))...(((...)))...)))","AAAUUUCCCAAAGGGUUUAAAGGGUUUCCCUUU")
coord=ct2coord(ct)
RNAPlot(coord,hl=c("GGGUUU","AAAUUU"),seqcols=c(2,4),labTF=TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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