validCT: Validate a CT File
In jpbida/RRNA: Secondary Structure Plotting for RNA
validCT R Documentation
Validate a CT File
Description
Given a CT file checks for correct column names, all nucleotides have positions greater than 0, unique rows per nucleotide, multiple pairings, duplicate pairings so that the CT file can be used to generate a secondary structure using bracket notation.
Usage
validCT(ct)
Arguments
ct
Dataframe generated from loadCT
Value
Returns messages indicating issues with the CT file that would prevent it from generating a secondary structure in bracket notation
Author(s)
JP Bida
jpbida/RRNA documentation built on April 28, 2024, 1:27 p.m.
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| validCT | R Documentation |
Validate a CT File
Description
Given a CT file checks for correct column names, all nucleotides have positions greater than 0, unique rows per nucleotide, multiple pairings, duplicate pairings so that the CT file can be used to generate a secondary structure using bracket notation.
Usage
validCT(ct)
Arguments
ct |
Dataframe generated from loadCT |
Value
Returns messages indicating issues with the CT file that would prevent it from generating a secondary structure in bracket notation
Author(s)
JP Bida
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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