pairScores: Identifies base-pairs from hydrogen bonding data
In jpbida/RRNA: Secondary Structure Plotting for RNA
pairScores R Documentation
Identifies base-pairs from hydrogen bonding data
Description
Given all hydrogen binding data from a PDB file identify the secondary structure that maximizes pairings using a greedy approach.
Usage
pairScores(PairDF)
Arguments
PairDF
Dataframe generated from PDB file using RSIM.
Value
Returns PairDF file with pairings removed that do not contribute to the bracket notation.
Author(s)
JP Bida
jpbida/RRNA documentation built on April 28, 2024, 1:27 p.m.
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| pairScores | R Documentation |
Identifies base-pairs from hydrogen bonding data
Description
Given all hydrogen binding data from a PDB file identify the secondary structure that maximizes pairings using a greedy approach.
Usage
pairScores(PairDF)
Arguments
PairDF |
Dataframe generated from PDB file using RSIM. |
Value
Returns PairDF file with pairings removed that do not contribute to the bracket notation.
Author(s)
JP Bida
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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