Files in js2264/cooleR
Analysing cool files in R with HiContacts

.Rbuildignore

.github/.gitignore

.github/workflows/rworkflows.yml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

R/4C.R R/AllGenerics.R R/Ps.R R/aggregate.R R/arithmetics.R R/boost.R R/checks.R R/cistrans.R R/coarsen.R R/compartments.R R/contacts.R R/diamond.R R/globals.R R/loops.R R/normalize.R R/plotting.R R/reexports.R R/scalogram.R R/subsample.R R/tracks.R R/utils.R README.md

_pkgdown.yml

inst/CITATION

inst/extdata/S288C-borders.bed

inst/extdata/S288C-loops.bedpe

man/Contacts.Rd man/HiContacts-plots.Rd man/Ps.Rd man/arithmetics.Rd man/checks.Rd man/cisTransRatio.Rd man/getCompartments.Rd man/getDiamondInsulation.Rd man/getLoops.Rd man/palettes.Rd man/plot4C.Rd man/plotMatrix.Rd man/plotPs.Rd man/plotSaddle.Rd man/plotScalogram.Rd man/reexports.Rd man/scalogram.Rd man/tracks.Rd man/virtual4C.Rd tests/testthat.R tests/testthat/test-arithmetics.R tests/testthat/test-comps-insulation-scalogram.R tests/testthat/test-data.R tests/testthat/test-plotMatrix.R tests/testthat/test-v4C-cistrans-Ps-utils.R vignettes/HiContacts.Rmd

js2264/cooleR documentation built on April 17, 2025, 4:13 p.m.

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