plot4C: Plotting virtual 4C profiles

In js2264/cooleR: Analysing cool files in R with HiContacts

Plotting virtual 4C profiles

Description

Plotting virtual 4C profiles

Usage

plot4C(x, mapping = ggplot2::aes(x = center, y = score, col = seqnames))

Arguments

x	GRanges, generally the output of virtual4C()
mapping	aes to pass on to ggplot2 (default: ggplot2::aes(x = center, y = score, col = seqnames))

Value

ggplot

Examples

contacts_yeast <- contacts_yeast()
v4C <- virtual4C(contacts_yeast, GenomicRanges::GRanges('II:490001-510000'))
plot4C(v4C)

js2264/cooleR documentation built on Oct. 3, 2024, 2:51 a.m.