getLoops: Finding loops in contact map
In js2264/cooleR: Analysing cool files in R with HiContacts
getLoops R Documentation
Finding loops in contact map
Description
Find loops using chromosight.
This function is actually provided by the HiCool package rather than
the HiContacts package. HiCool provides a self-managed
conda environment, and this limits
Usage
getLoops(...)
Arguments
...
Parameters passed to HiCool::getLoops().
js2264/cooleR documentation built on Jan. 29, 2024, 10:47 p.m.
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| getLoops | R Documentation |
Finding loops in contact map
Description
Find loops using chromosight.
This function is actually provided by the HiCool package rather than
the HiContacts package. HiCool provides a self-managed
conda environment, and this limits
Usage
getLoops(...)
Arguments
... |
Parameters passed to |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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