README.md
In jsemple19/methMatrix: Manipulate Lists of Methylation Matrices
methMatrix
Operations on methylation matrices from dSMF pipeline
Installation
This package requires samtools to extract the methylation data for each read. I recommend installing miniconda. And then install samtools with conda:
conda install -c bioconda samtools
Make sure the devtools package is installed and then install these packages from github:
#install.packages("devtools")
devtools::install_github("jsemple19/grangesutils")
devtools::install_github("jsemple19/methMatrix")
jsemple19/methMatrix documentation built on Aug. 19, 2022, 3:57 p.m.
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methMatrix
Operations on methylation matrices from dSMF pipeline
Installation
This package requires samtools to extract the methylation data for each read. I recommend installing miniconda. And then install samtools with conda:
conda install -c bioconda samtools
Make sure the devtools package is installed and then install these packages from github:
#install.packages("devtools")
devtools::install_github("jsemple19/grangesutils")
devtools::install_github("jsemple19/methMatrix")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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