Operations on methylation matrices from dSMF pipeline
This package requires samtools to extract the methylation data for each read. I recommend installing miniconda. And then install samtools with conda:
conda install -c bioconda samtools
Make sure the devtools package is installed and then install these packages from github:
#install.packages("devtools")
devtools::install_github("jsemple19/grangesutils")
devtools::install_github("jsemple19/methMatrix")
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