plotDSMFmetageneDF: Plot metagene by sample
In jsemple19/methMatrix: Manipulate Lists of Methylation Matrices
View source: R/methMatrixManipulation.R
plotDSMFmetageneDF R Documentation
Plot metagene by sample
Description
Plots metagene methylation frequency from dataframe extracted from matrices.
Usage
plotDSMFmetageneDF(metageneDF, maxPoints = 10000)
Arguments
metageneDF
ata frame with average methylation at relative coordinates extracted from all matrices for all samples
maxPoints
The maximum number of points to plot per sample. To avoid large files with too much overplotting, the defualt limit is set to 10000. Larger dataframes will be randomly sub-sampled
Value
A ggplot2 plot object
jsemple19/methMatrix documentation built on Aug. 19, 2022, 3:57 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/methMatrixManipulation.R
| plotDSMFmetageneDF | R Documentation |
Plot metagene by sample
Description
Plots metagene methylation frequency from dataframe extracted from matrices.
Usage
plotDSMFmetageneDF(metageneDF, maxPoints = 10000)
Arguments
metageneDF |
ata frame with average methylation at relative coordinates extracted from all matrices for all samples |
maxPoints |
The maximum number of points to plot per sample. To avoid large files with too much overplotting, the defualt limit is set to 10000. Larger dataframes will be randomly sub-sampled |
Value
A ggplot2 plot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.