getFullMatrices: Get full matrix of all positions in a window even if no C

In jsemple19/methMatrix: Manipulate Lists of Methylation Matrices

Get full matrix of all positions in a window even if no C

Description

In order to compare different promoters, we need to create a padded matrix with NAs in positions in between Cs.

Usage

getFullMatrices(matList, regionType, winSize = 500, workDir = ".")

Arguments

matList	A table of paths to matrices which have the same columns
regionType	A name for the type of region the matrices desribe
winSize	The size (in bp) of the window containing the matrices
workDir	The path to working directory

Value

A table of file paths to padded methylation matrices

jsemple19/methMatrix documentation built on Aug. 19, 2022, 3:57 p.m.