API for jspaezp/sctree
Tree based analysis of single rna-seq clusters
| Global functions | |
|---|---|
| AUCMarkerTest | Source code |
| DESeq2DETest | Source code |
| DiffExpTest | Source code |
| DiffTTest | Source code |
| DifferentialAUC | Source code |
| DifferentialLRT | Source code |
| FindAllMarkers | Man page Source code |
| FindAllMarkersNode | Man page |
| FindAllMarkers_ranger.Seurat | Man page Source code |
| FindConservedMarkers | Man page Source code |
| FindMarkers | Man page Source code |
| FindMarkers.Seurat | Man page Source code |
| FindMarkers.default | Man page Source code |
| FindMarkersNode | Man page |
| GLMDETest | Source code |
| LRDETest | Source code |
| MASTDETest | Source code |
| MarkerTest | Source code |
| NBModelComparison | Source code |
| RangerDE | Man page Source code |
| RegularizedTheta | Source code |
| WilcoxDETest | Source code |
| antibodies | Man page |
| as.data.frame.Seurat | Man page Source code |
| as.frequency.matrix | Man page Source code |
| as.garnett | Man page Source code |
| autoplot | Man page Source code |
| autoplot.matrix | Man page Source code |
| autoplot.table | Man page Source code |
| bimodLikData | Source code |
| cross_validate | Man page Source code |
| fit_ctree | Man page Source code |
| get_aliases | Man page Source code |
| get_cluster_mapping | Man page Source code |
| get_concensus_rules | Man page Source code |
| get_genesymbols | Man page Source code |
| ggheatmap_base | Man page Source code |
| include_roxygen_example | Man page Source code |
| is.confusion.matrix | Man page Source code |
| is_gene_membrane | Man page Source code |
| plot_flowstyle | Man page Source code |
| plot_flowstyle.Seurat | Man page Source code |
| plot_flowstyle.data.frame | Man page Source code |
| plot_gates | Man page Source code |
| print.concensus.rules | Man page Source code |
| print.garnett.list | Man page Source code |
| query_biocompare_antibodies | Man page Source code |
| query_biolegend_antibodies | Man page Source code |
| query_cc_antibodies | Man page Source code |
| query_sc_antibodies | Man page Source code |
| ranger_importances | Man page Source code |
| ranger_importances.Seurat | Source code |
| ranger_importances.data.frame | Source code |
| small_5050_mix | Man page |
| small_9901_mix | Man page |
