get_genesymbols: Gets the official gene symbol for protein or gene aliases
In jspaezp/sctree: Tree based analysis of single rna-seq clusters
Description
Usage
Arguments
Value
See Also
Examples
Description
gets the aliases for a series of common gene names
Usage
1
get_genesymbols(gene_aliases, db = org.Hs.eg.db::org.Hs.eg.db)
Arguments
gene_aliases
a character vector of gene aliases zb: ERK
db
a database that inherits the select property.
defaults to org.Hs.eg.db
Value
a named list whose names are the provided aliases and the elements
are the character vectors with the gene names
See Also
get_aliases
Examples
1
2
3
4
5
6
7
8
9
get_genesymbols("ERK")
# $ERK
# [1] "EPHB2" "MAPK1"
get_genesymbols(c("SUPERFAKEGENE", "ERK"))
# $SUPERFAKEGENE
# [1] NA
#
# $ERK
# [1] "EPHB2" "MAPK1"
jspaezp/sctree documentation built on April 30, 2020, 10:36 p.m.
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Description Usage Arguments Value See Also Examples
Description
gets the aliases for a series of common gene names
Usage
1 | get_genesymbols(gene_aliases, db = org.Hs.eg.db::org.Hs.eg.db)
|
Arguments
gene_aliases |
a character vector of gene aliases zb: ERK |
db |
a database that inherits the select property. defaults to org.Hs.eg.db |
Value
a named list whose names are the provided aliases and the elements are the character vectors with the gene names
See Also
get_aliases
Examples
1 2 3 4 5 6 7 8 9 | get_genesymbols("ERK")
# $ERK
# [1] "EPHB2" "MAPK1"
get_genesymbols(c("SUPERFAKEGENE", "ERK"))
# $SUPERFAKEGENE
# [1] NA
#
# $ERK
# [1] "EPHB2" "MAPK1"
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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