buildSimplifiedMarginal: Build a simplified version of the marginal table with columns...

In jweile/tileseqMave: TileSeq MAVE Analysis pipeline

Build a simplified version of the marginal table with columns for variant, mean marginal frequency, marginal depth and tile, with 0-depth variants filtered out

Description

Build a simplified version of the marginal table with columns for variant, mean marginal frequency, marginal depth and tile, with 0-depth variants filtered out

Usage

buildSimplifiedMarginal(
  marginalSplitChanges,
  nsMarginalMeans,
  nsMarginalDepth,
  marginalTiles
)

Arguments

marginalSplitChanges	table with split codon changes from marginal counts table
nsMarginalMeans	table with mean marginal frequency across nonselect technical replicates
nsMarginalDepth	table with mean marginal depth across nonselect technical replicates
marginalTiles	table with tile assignments for each entry in marginal counts table

Value

table with variant, mean marginal frequency, marginal depth and tile

jweile/tileseqMave documentation built on April 5, 2024, 4:51 p.m.