calcDepthDrops: Calculate relative drops in effective sequencing depth for...
In jweile/tileseqMave: TileSeq MAVE Analysis pipeline
calcDepthDrops R Documentation
Calculate relative drops in effective sequencing depth for each variant
Description
Calculate relative drops in effective sequencing depth for each variant
Usage
calcDepthDrops(xCounts, xTiles, depthTable, mc.cores = 6)
Arguments
xCounts
marginal or all counts table
xTiles
tile assignments for each variant in the table
depthTable
raw depth table
mc.cores
number of processes to run in parallel for multi-core processing
Value
a table listing the relative drop for each variant in each
condition-time-replicate combination
jweile/tileseqMave documentation built on April 5, 2024, 4:51 p.m.
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| calcDepthDrops | R Documentation |
Calculate relative drops in effective sequencing depth for each variant
Description
Calculate relative drops in effective sequencing depth for each variant
Usage
calcDepthDrops(xCounts, xTiles, depthTable, mc.cores = 6)
Arguments
xCounts |
marginal or all counts table |
xTiles |
tile assignments for each variant in the table |
depthTable |
raw depth table |
mc.cores |
number of processes to run in parallel for multi-core processing |
Value
a table listing the relative drop for each variant in each condition-time-replicate combination
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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