plot_vdj_gex_univariate_qc: Scatterplot of two features of interest from colData with...

In keshav-motwani/scanalysis: Multi-Sample Visualization and Immune Repertoire Analysis Utilities for Single-Cell Data

Description

Scatterplot of two features of interest from colData with annotated thresholds and counts based on filters

Usage

plot_vdj_gex_univariate_qc(
  sce_list,
  x_filters = NULL,
  vdj_filters = NULL,
  x,
  facet_rows = NULL,
  facet_columns = NULL,
  ...
)

Arguments

sce_list	list of SingleCellExperiment objects
x_filters	list of filters for each SCE object in sce_list from scater::isOutlier, or a vector with attribute named thresholds that is a vector with min and max allowed values
x	numeric column from colData that is in all objects in sce_list
facet_rows	columns to facet on
facet_columns	columns to facet on
...	other params passed into plot_gex_univariate_qc

Examples

NULL

keshav-motwani/scanalysis documentation built on Feb. 4, 2021, 2:21 a.m.