fac2palette: Encodes logic of how to handle named-vector and functional...

In kharchenkolab/sccore: Core Utilities for Single-Cell RNA-Seq

Encodes logic of how to handle named-vector and functional palettes. Used primarily within embeddingGroupPlot()

Description

Encodes logic of how to handle named-vector and functional palettes. Used primarily within embeddingGroupPlot()

Usage

fac2palette(groups, palette, unclassified.cell.color = "gray50")

Arguments

groups	vector of cluster labels, names contain cell names
palette	vector or list or function (default=NULL). Accepts number of colors and return list of colors (i.e. see 'colorRampPalette')
unclassified.cell.color	Color for unclassified cells (default='gray50')

Value

vector or palette

kharchenkolab/sccore documentation built on June 2, 2025, 12:43 p.m.