rcpp_distIUPAC: rcpp_distIUPAC
In kullrich/distIUPAC: calculates IUPAC distances on Biostrings DNAStringSet and BStringSet objects
Description
Usage
Arguments
Author(s)
See Also
Examples
Description
This function calculates pairwise IUPAC distances on Biostrings
DNAStringSet and BStringSet objects in a parallel fashion.
Usage
1
rcpp_distIUPAC(dnavector, ncores=1)
Arguments
dnavector
as.character(DNAStringSet)
ncores
number of parallel cores to process pairwise distance
calculation [default: 1]
Author(s)
Kristian K Ullrich
See Also
distIUPAC,
rcpp_distIUPAC_ab,
distIUPACmatrix,
rcpp_distIUPACmatrix,
dist.dna
Examples
1
2
data("MySequences", package="distIUPAC")
rcpp_distIUPAC(as.character(MySequences[1:10]), ncores=2)
kullrich/distIUPAC documentation built on Jan. 9, 2020, 2:50 p.m.
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Description Usage Arguments Author(s) See Also Examples
Description
This function calculates pairwise IUPAC distances on Biostrings
DNAStringSet and BStringSet objects in a parallel fashion.
Usage
1 | rcpp_distIUPAC(dnavector, ncores=1)
|
Arguments
dnavector |
|
ncores |
number of parallel cores to process pairwise distance calculation [default: 1] |
Author(s)
Kristian K Ullrich
See Also
distIUPAC,
rcpp_distIUPAC_ab,
distIUPACmatrix,
rcpp_distIUPACmatrix,
dist.dna
Examples
1 2 | data("MySequences", package="distIUPAC")
rcpp_distIUPAC(as.character(MySequences[1:10]), ncores=2)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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