accession_gene_table: Uniprot protein accession number to HGNC gene symbol mapping

In lagelab/Genoppi: genoppi

Uniprot protein accession number to HGNC gene symbol mapping

Description

A dataset containing 67,519 Uniprot accession number to HGNC gene symbol pairings.

Usage

accession_gene_table

Format

A data frame with 67,519 rows and 2 variables:

accession_number

Uniprot accession number (e.g. P10415)

gene

HGNC gene symbol (e.g. BCL2)

Source

ID mapping data for human protein-coding genes downloaded from Uniprot: https://www.uniprot.org

References

UniProt Consortium. UniProt: a worldwide hub of protein knowledge. Nucleic Acids Res. 2019;47(D1):D506-D515. doi:10.1093/nar/gky1049

See Also

Other datasets: bioplex_table, example_data2, example_data3, example_data, genes_snps, gnomad_table, goa_bp_table, goa_cc_table, goa_mf_table, gtex_protein, gtex_rna, gwas_table, hgnc_group_table, hpa_rna, inweb_table, irefindex_table, msigdb_c1_table, msigdb_c2_table, msigdb_c3_table, msigdb_c4_table, msigdb_c5_table, msigdb_c6_table, msigdb_c7_table, msigdb_h_table

lagelab/Genoppi documentation built on Oct. 13, 2022, 2:36 p.m.