explore: Interactively explore a MultiGSEAResult via a shiny app

In lianos/multiGSEA.shiny: Provides shiny components to visualize multilGSEA results

Description

This will launch a shiny application that enables exploratory analysis of the results from the different GSEA methods run within a MultiGSEAResult.

Reference the "shiny-multiGSEA" vignette for more detailed documentation of the functionality provided by this application.

Usage

explore(x)

Arguments

x	A MultiGSEAResult object, or path to one as an *.rds. If missing, the shiny app will load without a MultiGSEAResult object to explore, and the user can upload one into the app.

Examples

## Not run: 
vm <- exampleExpressionSet()
gdb <- exampleGeneSetDb()
mg <- multiGSEA(gdb, vm, vm$design, methods=c('camera', 'fry'))
explore(mg)

## End(Not run)

lianos/multiGSEA.shiny documentation built on Sept. 15, 2020, 10:45 p.m.