plotRCAHeatmap: Plot heatmap of projection to the RCA panel
In linquynus/RCAv2-beta: Reference Component Analysis
View source: R/plotRCAHeatmap.R
Description
Plot heatmap of projection to the RCA panel
Usage
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plotRCAHeatmap(
rca.obj,
var.thrs = 0.1,
width = 20,
height = 20,
folderpath = ".",
filename = "RCA_Heatmap.pdf",
extraCellProperty = NULL
)
Arguments
rca.obj
data matrix (genes x cells)
var.thrs
Minimum threshold of variance for cell type correlations.
width
width of plot in inches. Default is 20.
height
height of plot in inches. Default is 20.
folderpath
path to save heatmap to
filename
file name of saved heatmap
extraCellProperty
vector indicating cell property to be plotted in heatmap
linquynus/RCAv2-beta documentation built on Aug. 9, 2020, 12:34 a.m.
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View source: R/plotRCAHeatmap.R
Description
Plot heatmap of projection to the RCA panel
Usage
1 2 3 4 5 6 7 8 9 | plotRCAHeatmap(
rca.obj,
var.thrs = 0.1,
width = 20,
height = 20,
folderpath = ".",
filename = "RCA_Heatmap.pdf",
extraCellProperty = NULL
)
|
Arguments
rca.obj |
data matrix (genes x cells) |
var.thrs |
Minimum threshold of variance for cell type correlations. |
width |
width of plot in inches. Default is 20. |
height |
height of plot in inches. Default is 20. |
folderpath |
path to save heatmap to |
filename |
file name of saved heatmap |
extraCellProperty |
vector indicating cell property to be plotted in heatmap |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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